Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 PUDPP3-201ENST00000445368 636 ntBASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 AC012441.1-201ENST00000446669 685 ntBASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 TSPY16P-201ENST00000449843 468 ntBASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 AC092183.1-201ENST00000469884 875 ntBASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 WFDC1-204ENST00000613603 549 ntBASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 AC015818.8-201ENST00000587907 1519 ntBASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 BAATP1-201ENST00000412284 1225 ntBASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 PTP4A1P2-201ENST00000546033 454 ntBASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 AL033527.5-201ENST00000641382 801 ntBASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR2J2Q9GZM3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms