Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 AC126335.2-201ENST00000623362 4637 ntBASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 RN7SKP230-201ENST00000365642 335 ntBASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 ACTBP8-201ENST00000403258 1108 ntBASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 SOCS2P1-201ENST00000417727 557 ntBASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
AMBRA1Q9C0C7 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 ARSEP1-201ENST00000420443 635 ntBASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 GCOM2-201ENST00000509133 1104 ntBASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms