Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 AC106820.3-201ENST00000561653 397 ntBASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 MIR6869-201ENST00000619434 62 ntBASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 GPR182-203ENST00000622922 591 ntBASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 AC015818.8-201ENST00000587907 1519 ntBASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 AC092053.3-201ENST00000641308 4975 ntBASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 AC007969.1-201ENST00000433675 447 ntBASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 GOLGA2P4-201ENST00000441462 777 ntBASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 AC073413.1-201ENST00000603927 732 ntBASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 AL118558.3-201ENST00000607414 1079 ntBASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 ZACNP1-201ENST00000612259 710 ntBASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.31□□□□□ -0.44
PCGF1Q9BSM1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 AL356585.2-201ENST00000625078 2396 ntBASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms