Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 AC107375.1-201ENST00000564464 2231 ntBASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 UXT-AS1-201ENST00000590504 1525 ntBASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 AC010536.1-201ENST00000538868 2611 ntBASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 AP003969.2-201ENST00000623739 2275 ntBASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 MARK2P9-201ENST00000430958 1727 ntBASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 RPL13P2-201ENST00000440687 659 ntBASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 KRT18P21-201ENST00000515767 1272 ntBASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 LINC01115-203ENST00000606068 577 ntBASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 AL928654.5-201ENST00000624831 2501 ntBASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
SEC22CQ9BRL7 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SEC22CQ9BRL7 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
SEC22CQ9BRL7 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.33□□□□□ -0.43
SEC22CQ9BRL7 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 AC115284.2-201ENST00000624646 2054 ntBASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 FAM86C2P-203ENST00000528684 1004 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms