Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 AC134684.3-201ENST00000641758 218 ntBASIC14.21□□□□□ -0.13
EBF4Q9BQW3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EBF4Q9BQW3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.21□□□□□ -0.14
EBF4Q9BQW3 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
EBF4Q9BQW3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.21□□□□□ -0.14
EBF4Q9BQW3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.21□□□□□ -0.14
EBF4Q9BQW3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
EBF4Q9BQW3 AC073869.1-201ENST00000415574 2762 ntBASIC14.21□□□□□ -0.14
EBF4Q9BQW3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
EBF4Q9BQW3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.21□□□□□ -0.14
EBF4Q9BQW3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
EBF4Q9BQW3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
EBF4Q9BQW3 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 AL139385.1-201ENST00000611744 3272 ntBASIC14.2□□□□□ -0.14
EBF4Q9BQW3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 AP000347.1-202ENST00000435868 847 ntBASIC14.2□□□□□ -0.14
EBF4Q9BQW3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.2□□□□□ -0.14
EBF4Q9BQW3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 AC118758.2-201ENST00000614242 2813 ntBASIC14.19□□□□□ -0.14
EBF4Q9BQW3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 ACTBP8-201ENST00000403258 1108 ntBASIC14.19□□□□□ -0.14
EBF4Q9BQW3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 AC025678.2-201ENST00000562061 970 ntBASIC14.19□□□□□ -0.14
EBF4Q9BQW3 AC004449.1-201ENST00000564240 433 ntBASIC14.19□□□□□ -0.14
EBF4Q9BQW3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms