Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 AP005117.1-202ENST00000581724 1908 ntBASIC14.8□□□□□ -0.04
PHOX2BQ99453 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.79□□□□□ -0.04
PHOX2BQ99453 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 PTGER4P2-201ENST00000328411 252 ntBASIC14.79□□□□□ -0.04
PHOX2BQ99453 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 RN7SKP175-201ENST00000408472 289 ntBASIC14.79□□□□□ -0.04
PHOX2BQ99453 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 RHOQP2-201ENST00000449922 579 ntBASIC14.79□□□□□ -0.04
PHOX2BQ99453 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 PTGER4P3-201ENST00000458150 252 ntBASIC14.79□□□□□ -0.04
PHOX2BQ99453 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 AC026470.1-201ENST00000478038 846 ntBASIC14.79□□□□□ -0.04
PHOX2BQ99453 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 RNA5SP417-201ENST00000516459 108 ntBASIC14.79□□□□□ -0.04
PHOX2BQ99453 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 MTATP6P25-201ENST00000574491 261 ntBASIC14.79□□□□□ -0.04
PHOX2BQ99453 AP005264.6-204ENST00000588436 719 ntBASIC14.79□□□□□ -0.04
PHOX2BQ99453 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 Z98259.2-201ENST00000641583 609 ntBASIC14.79□□□□□ -0.04
PHOX2BQ99453 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.79□□□□□ -0.04
PHOX2BQ99453 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PHOX2BQ99453 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 AC021305.1-201ENST00000520656 1514 ntBASIC14.78□□□□□ -0.04
PHOX2BQ99453 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 AL645937.2-201ENST00000396808 931 ntBASIC14.78□□□□□ -0.04
PHOX2BQ99453 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 AC010900.1-201ENST00000449849 1296 ntBASIC14.78□□□□□ -0.04
PHOX2BQ99453 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms