Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 LAP3P2-201ENST00000454686 1454 ntBASIC12.08□□□□□ -0.48
GAFA1Q96PS6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 AL365209.1-201ENST00000624418 6473 ntBASIC12.07□□□□□ -0.48
GAFA1Q96PS6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 AC006033.1-201ENST00000440505 426 ntBASIC12.07□□□□□ -0.48
GAFA1Q96PS6 OR2R1P-201ENST00000441404 914 ntBASIC12.07□□□□□ -0.48
GAFA1Q96PS6 AC004898.1-201ENST00000451057 766 ntBASIC12.07□□□□□ -0.48
GAFA1Q96PS6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 AC013355.1-201ENST00000562625 723 ntBASIC12.07□□□□□ -0.48
GAFA1Q96PS6 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 AC243960.2-201ENST00000600996 747 ntBASIC12.07□□□□□ -0.48
GAFA1Q96PS6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 AL136295.7-201ENST00000619226 1200 ntBASIC12.07□□□□□ -0.48
GAFA1Q96PS6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 AHCYP4-201ENST00000419201 1315 ntBASIC12.07□□□□□ -0.48
GAFA1Q96PS6 TUBB8P4-201ENST00000511806 1324 ntBASIC12.07□□□□□ -0.48
GAFA1Q96PS6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.07□□□□□ -0.48
GAFA1Q96PS6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 TCAM1P-207ENST00000485295 1537 ntBASIC12.06□□□□□ -0.48
GAFA1Q96PS6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 CICP16-201ENST00000502609 2813 ntBASIC12.06□□□□□ -0.48
GAFA1Q96PS6 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAFA1Q96PS6 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms