Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.47□□□□□ -0.09
ECHDC3Q96DC8 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ECHDC3Q96DC8 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 PDIA3P2-201ENST00000428073 158 ntBASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 Z97180.1-201ENST00000445173 988 ntBASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 IGHJ2P-201ENST00000454480 60 ntBASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 CHMP4BP1-201ENST00000556017 588 ntBASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 AC093752.3-201ENST00000567343 901 ntBASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ECHDC3Q96DC8 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ECHDC3Q96DC8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ECHDC3Q96DC8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ECHDC3Q96DC8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ECHDC3Q96DC8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
ECHDC3Q96DC8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 FRMPD2B-201ENST00000431305 1347 ntBASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 AL662890.1-201ENST00000396818 632 ntBASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 SLC25A24P2-201ENST00000415059 510 ntBASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 AC152010.1-201ENST00000415779 2006 ntBASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 AC073150.1-201ENST00000450406 1084 ntBASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 AC012618.1-201ENST00000461223 412 ntBASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 POU5F1P2-201ENST00000521750 823 ntBASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 AF254983.2-201ENST00000612331 135 ntBASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 AC091812.3-201ENST00000621362 345 ntBASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 AC023908.3-201ENST00000564211 3047 ntBASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ECHDC3Q96DC8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms