Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APH1AQ96BI3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APH1AQ96BI3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APH1AQ96BI3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APH1AQ96BI3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APH1AQ96BI3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
APH1AQ96BI3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.93□□□□□ -0.34
APH1AQ96BI3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
APH1AQ96BI3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APH1AQ96BI3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
APH1AQ96BI3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
APH1AQ96BI3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.93□□□□□ -0.34
APH1AQ96BI3 TMBIM7P-202ENST00000641474 1516 ntBASIC12.93□□□□□ -0.34
APH1AQ96BI3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
APH1AQ96BI3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APH1AQ96BI3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APH1AQ96BI3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.92□□□□□ -0.34
APH1AQ96BI3 DPM3-202ENST00000368399 517 ntBASIC12.92□□□□□ -0.34
APH1AQ96BI3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 EIF4HP1-201ENST00000453115 687 ntBASIC12.92□□□□□ -0.34
APH1AQ96BI3 AC006122.1-201ENST00000493323 440 ntBASIC12.92□□□□□ -0.34
APH1AQ96BI3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 AL160314.3-201ENST00000556041 767 ntBASIC12.92□□□□□ -0.34
APH1AQ96BI3 SORD2P-201ENST00000558556 1069 ntBASIC12.92□□□□□ -0.34
APH1AQ96BI3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 AC090164.2-201ENST00000611487 516 ntBASIC12.92□□□□□ -0.34
APH1AQ96BI3 AC138649.2-201ENST00000615886 705 ntBASIC12.92□□□□□ -0.34
APH1AQ96BI3 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.92□□□□□ -0.34
APH1AQ96BI3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 AC215219.1-201ENST00000400706 1817 ntBASIC12.92□□□□□ -0.34
APH1AQ96BI3 AC144522.1-201ENST00000625111 1658 ntBASIC12.92□□□□□ -0.34
APH1AQ96BI3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APH1AQ96BI3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
APH1AQ96BI3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 GPAA1P2-201ENST00000417923 928 ntBASIC12.91□□□□□ -0.34
APH1AQ96BI3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 AC104073.2-201ENST00000453737 312 ntBASIC12.91□□□□□ -0.34
APH1AQ96BI3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.91□□□□□ -0.34
APH1AQ96BI3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APH1AQ96BI3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms