Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 KRT90P-201ENST00000549264 1064 ntBASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 AL596325.1-201ENST00000563991 1082 ntBASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 RN7SL713P-201ENST00000582127 302 ntBASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 AC027307.3-201ENST00000594262 1100 ntBASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 BTNL10-201ENST00000595971 695 ntBASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 AC009093.10-201ENST00000641956 1442 ntBASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 KRT8P4-201ENST00000509735 1454 ntBASIC17.12■□□□□ 0.33
CCDC83Q8IWF9 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 CNN2P8-201ENST00000421872 913 ntBASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 AC007551.1-201ENST00000457394 519 ntBASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC83Q8IWF9 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms