Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AC018735.1-201ENST00000437208 1502 ntBASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AC027601.5-201ENST00000624065 2482 ntBASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AL008718.2-201ENST00000609206 1313 ntBASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 AC012617.1-204ENST00000586340 2305 ntBASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 MBLAC2-202ENST00000514906 1936 ntBASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 CICP17-201ENST00000418553 2377 ntBASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 RNMTL1P1-201ENST00000454103 560 ntBASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 AC005962.1-201ENST00000584100 773 ntBASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD3Q7Z3D4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 KRT8P29-201ENST00000420409 1371 ntBASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 POM121L10P-201ENST00000436994 1285 ntBASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 AC104306.2-201ENST00000451877 341 ntBASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 AC007663.3-201ENST00000609632 465 ntBASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 MIR6074-201ENST00000612054 107 ntBASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 AL133338.1-201ENST00000565695 1517 ntBASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 HSPA7-201ENST00000445535 1927 ntBASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms