Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 MAGEA7P-201ENST00000436482 942 ntBASIC16.32■□□□□ 0.2
SREBF2Q12772 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.32■□□□□ 0.2
SREBF2Q12772 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.32■□□□□ 0.2
SREBF2Q12772 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC16.32■□□□□ 0.2
SREBF2Q12772 LINC00115-201ENST00000473798 1317 ntBASIC16.32■□□□□ 0.2
SREBF2Q12772 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.32■□□□□ 0.2
SREBF2Q12772 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SREBF2Q12772 AC113347.2-201ENST00000512350 279 ntBASIC16.32■□□□□ 0.2
SREBF2Q12772 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC16.32■□□□□ 0.2
SREBF2Q12772 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SREBF2Q12772 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC16.32■□□□□ 0.2
SREBF2Q12772 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC16.32■□□□□ 0.2
SREBF2Q12772 AC079414.2-201ENST00000567157 1104 ntBASIC16.32■□□□□ 0.2
SREBF2Q12772 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SREBF2Q12772 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.32■□□□□ 0.2
SREBF2Q12772 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.32■□□□□ 0.2
SREBF2Q12772 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SREBF2Q12772 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SREBF2Q12772 AC117503.4-201ENST00000623229 1418 ntBASIC16.32■□□□□ 0.2
SREBF2Q12772 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SREBF2Q12772 AL357143.1-203ENST00000639750 881 ntBASIC16.32■□□□□ 0.2
SREBF2Q12772 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
SREBF2Q12772 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.31■□□□□ 0.2
SREBF2Q12772 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SREBF2Q12772 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SREBF2Q12772 TBC1D27-202ENST00000424239 1573 ntBASIC16.31■□□□□ 0.2
SREBF2Q12772 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.31■□□□□ 0.2
SREBF2Q12772 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.31■□□□□ 0.2
SREBF2Q12772 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC16.31■□□□□ 0.2
SREBF2Q12772 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC16.31■□□□□ 0.2
SREBF2Q12772 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC16.31■□□□□ 0.2
SREBF2Q12772 SORD2P-201ENST00000558556 1069 ntBASIC16.31■□□□□ 0.2
SREBF2Q12772 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC16.31■□□□□ 0.2
SREBF2Q12772 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC16.31■□□□□ 0.2
SREBF2Q12772 AL353622.2-201ENST00000605846 425 ntBASIC16.31■□□□□ 0.2
SREBF2Q12772 AC090510.3-201ENST00000615831 821 ntBASIC16.31■□□□□ 0.2
SREBF2Q12772 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC16.31■□□□□ 0.2
SREBF2Q12772 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SREBF2Q12772 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.31■□□□□ 0.2
SREBF2Q12772 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SREBF2Q12772 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.31■□□□□ 0.2
SREBF2Q12772 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SREBF2Q12772 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SREBF2Q12772 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SREBF2Q12772 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.31■□□□□ 0.2
SREBF2Q12772 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SREBF2Q12772 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.3■□□□□ 0.2
SREBF2Q12772 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC16.3■□□□□ 0.2
SREBF2Q12772 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.3■□□□□ 0.2
SREBF2Q12772 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SREBF2Q12772 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SREBF2Q12772 AC020931.1-201ENST00000589622 1346 ntBASIC16.3■□□□□ 0.2
SREBF2Q12772 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SREBF2Q12772 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 MED15P3-201ENST00000413613 326 ntBASIC16.3■□□□□ 0.2
SREBF2Q12772 AHCYP3-201ENST00000420053 1279 ntBASIC16.3■□□□□ 0.2
SREBF2Q12772 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.3■□□□□ 0.2
SREBF2Q12772 AC026412.1-206ENST00000502273 206 ntBASIC16.3■□□□□ 0.2
SREBF2Q12772 AC147876.1-201ENST00000504408 322 ntBASIC16.3■□□□□ 0.2
SREBF2Q12772 CTBP2P6-201ENST00000526402 1229 ntBASIC16.3■□□□□ 0.2
SREBF2Q12772 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.3■□□□□ 0.2
SREBF2Q12772 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC16.3■□□□□ 0.2
SREBF2Q12772 AC048382.6-201ENST00000621980 1223 ntBASIC16.3■□□□□ 0.2
SREBF2Q12772 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms