Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.27■□□□□ 0.04
IRX4P78413 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.27■□□□□ 0.04
IRX4P78413 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
IRX4P78413 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.27■□□□□ 0.04
IRX4P78413 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
IRX4P78413 AL133267.1-201ENST00000398220 340 ntBASIC15.27■□□□□ 0.04
IRX4P78413 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.27■□□□□ 0.04
IRX4P78413 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.27■□□□□ 0.04
IRX4P78413 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.27■□□□□ 0.04
IRX4P78413 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.27■□□□□ 0.04
IRX4P78413 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
IRX4P78413 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.27■□□□□ 0.04
IRX4P78413 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.27■□□□□ 0.04
IRX4P78413 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IRX4P78413 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.27■□□□□ 0.04
IRX4P78413 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.27■□□□□ 0.04
IRX4P78413 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.27■□□□□ 0.04
IRX4P78413 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.27■□□□□ 0.04
IRX4P78413 U62317.3-201ENST00000608319 855 ntBASIC15.27■□□□□ 0.04
IRX4P78413 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.27■□□□□ 0.04
IRX4P78413 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.27■□□□□ 0.03
IRX4P78413 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
IRX4P78413 AC131212.3-201ENST00000624087 4219 ntBASIC15.27■□□□□ 0.03
IRX4P78413 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
IRX4P78413 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
IRX4P78413 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
IRX4P78413 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IRX4P78413 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.26■□□□□ 0.03
IRX4P78413 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
IRX4P78413 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
IRX4P78413 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
IRX4P78413 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
IRX4P78413 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
IRX4P78413 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
IRX4P78413 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.26■□□□□ 0.03
IRX4P78413 POM121L10P-201ENST00000436994 1285 ntBASIC15.26■□□□□ 0.03
IRX4P78413 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.26■□□□□ 0.03
IRX4P78413 IMP3P2-201ENST00000489760 475 ntBASIC15.26■□□□□ 0.03
IRX4P78413 GAPDHP40-201ENST00000505218 1006 ntBASIC15.26■□□□□ 0.03
IRX4P78413 AC126915.1-201ENST00000522847 1038 ntBASIC15.26■□□□□ 0.03
IRX4P78413 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.26■□□□□ 0.03
IRX4P78413 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.26■□□□□ 0.03
IRX4P78413 ECM1P1-201ENST00000604092 1279 ntBASIC15.26■□□□□ 0.03
IRX4P78413 AC025181.2-201ENST00000606994 802 ntBASIC15.26■□□□□ 0.03
IRX4P78413 AC097724.1-201ENST00000609581 426 ntBASIC15.26■□□□□ 0.03
IRX4P78413 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.26■□□□□ 0.03
IRX4P78413 BX539320.1-201ENST00000623759 877 ntBASIC15.26■□□□□ 0.03
IRX4P78413 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.26■□□□□ 0.03
IRX4P78413 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.26■□□□□ 0.03
IRX4P78413 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.26■□□□□ 0.03
IRX4P78413 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.26■□□□□ 0.03
IRX4P78413 AL354989.2-201ENST00000435838 1540 ntBASIC15.26■□□□□ 0.03
IRX4P78413 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 PEG13-201ENST00000631594 5667 ntBASIC15.26■□□□□ 0.03
IRX4P78413 AC018442.1-201ENST00000421439 2061 ntBASIC15.26■□□□□ 0.03
IRX4P78413 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.26■□□□□ 0.03
IRX4P78413 AC012508.2-201ENST00000567613 1472 ntBASIC15.26■□□□□ 0.03
IRX4P78413 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms