Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 AC111170.3-201ENST00000624282 2464 ntBASIC14.18□□□□□ -0.14
YBX1P67809 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.18□□□□□ -0.14
YBX1P67809 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
YBX1P67809 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
YBX1P67809 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.18□□□□□ -0.14
YBX1P67809 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.17□□□□□ -0.14
YBX1P67809 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.17□□□□□ -0.14
YBX1P67809 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
YBX1P67809 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.17□□□□□ -0.14
YBX1P67809 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.17□□□□□ -0.14
YBX1P67809 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
YBX1P67809 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
YBX1P67809 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.17□□□□□ -0.14
YBX1P67809 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
YBX1P67809 BTBD6P1-201ENST00000412176 1267 ntBASIC14.17□□□□□ -0.14
YBX1P67809 AL354877.1-201ENST00000424412 413 ntBASIC14.17□□□□□ -0.14
YBX1P67809 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.17□□□□□ -0.14
YBX1P67809 ACTBP11-201ENST00000436287 1126 ntBASIC14.17□□□□□ -0.14
YBX1P67809 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.17□□□□□ -0.14
YBX1P67809 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
YBX1P67809 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.17□□□□□ -0.14
YBX1P67809 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.17□□□□□ -0.14
YBX1P67809 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.17□□□□□ -0.14
YBX1P67809 AC104982.3-201ENST00000581995 514 ntBASIC14.17□□□□□ -0.14
YBX1P67809 AC132192.2-201ENST00000596206 1147 ntBASIC14.17□□□□□ -0.14
YBX1P67809 AC091271.1-201ENST00000611877 1162 ntBASIC14.17□□□□□ -0.14
YBX1P67809 AL162426.1-201ENST00000624141 743 ntBASIC14.17□□□□□ -0.14
YBX1P67809 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
YBX1P67809 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.17□□□□□ -0.14
YBX1P67809 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
YBX1P67809 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
YBX1P67809 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
YBX1P67809 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
YBX1P67809 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
YBX1P67809 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.16□□□□□ -0.14
YBX1P67809 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.16□□□□□ -0.14
YBX1P67809 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
YBX1P67809 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.16□□□□□ -0.14
YBX1P67809 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
YBX1P67809 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
YBX1P67809 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
YBX1P67809 MIR663B-201ENST00000408361 115 ntBASIC14.16□□□□□ -0.14
YBX1P67809 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.16□□□□□ -0.14
YBX1P67809 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.16□□□□□ -0.14
YBX1P67809 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.16□□□□□ -0.14
YBX1P67809 TMEM198B-204ENST00000484016 896 ntBASIC14.16□□□□□ -0.14
YBX1P67809 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.16□□□□□ -0.14
YBX1P67809 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.16□□□□□ -0.14
YBX1P67809 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.16□□□□□ -0.14
YBX1P67809 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.16□□□□□ -0.14
YBX1P67809 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
YBX1P67809 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.16□□□□□ -0.14
YBX1P67809 AGAP10P-201ENST00000454844 2418 ntBASIC14.16□□□□□ -0.14
YBX1P67809 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
YBX1P67809 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
YBX1P67809 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
YBX1P67809 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms