Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TMBIM7P-202ENST00000641474 1516 ntBASIC13.97□□□□□ -0.17
VSX2P58304 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.97□□□□□ -0.17
VSX2P58304 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.97□□□□□ -0.17
VSX2P58304 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.97□□□□□ -0.17
VSX2P58304 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VSX2P58304 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VSX2P58304 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.97□□□□□ -0.17
VSX2P58304 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VSX2P58304 FNTAP2-201ENST00000430308 634 ntBASIC13.97□□□□□ -0.17
VSX2P58304 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.97□□□□□ -0.17
VSX2P58304 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.97□□□□□ -0.17
VSX2P58304 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.97□□□□□ -0.17
VSX2P58304 SCARNA21-201ENST00000517026 139 ntBASIC13.97□□□□□ -0.17
VSX2P58304 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.97□□□□□ -0.17
VSX2P58304 AC013355.1-201ENST00000562625 723 ntBASIC13.97□□□□□ -0.17
VSX2P58304 AC103810.3-201ENST00000583567 96 ntBASIC13.97□□□□□ -0.17
VSX2P58304 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.97□□□□□ -0.17
VSX2P58304 AC138649.2-201ENST00000615886 705 ntBASIC13.97□□□□□ -0.17
VSX2P58304 AL136295.7-201ENST00000619226 1200 ntBASIC13.97□□□□□ -0.17
VSX2P58304 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.97□□□□□ -0.17
VSX2P58304 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.97□□□□□ -0.17
VSX2P58304 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.97□□□□□ -0.17
VSX2P58304 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VSX2P58304 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VSX2P58304 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.97□□□□□ -0.17
VSX2P58304 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
VSX2P58304 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.97□□□□□ -0.17
VSX2P58304 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
VSX2P58304 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.97□□□□□ -0.17
VSX2P58304 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VSX2P58304 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
VSX2P58304 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
VSX2P58304 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
VSX2P58304 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.96□□□□□ -0.17
VSX2P58304 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
VSX2P58304 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
VSX2P58304 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
VSX2P58304 MYADML-201ENST00000474610 2147 ntBASIC13.96□□□□□ -0.17
VSX2P58304 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
VSX2P58304 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
VSX2P58304 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 AC144522.1-201ENST00000625111 1658 ntBASIC13.96□□□□□ -0.17
VSX2P58304 AC138028.6-201ENST00000616106 1482 ntBASIC13.96□□□□□ -0.17
VSX2P58304 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
VSX2P58304 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.96□□□□□ -0.17
VSX2P58304 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.96□□□□□ -0.17
VSX2P58304 AKR7A2P1-201ENST00000460134 915 ntBASIC13.96□□□□□ -0.17
VSX2P58304 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.96□□□□□ -0.17
VSX2P58304 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 SCARNA20.5-201ENST00000516991 142 ntBASIC13.96□□□□□ -0.17
VSX2P58304 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.96□□□□□ -0.17
VSX2P58304 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.96□□□□□ -0.17
VSX2P58304 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.96□□□□□ -0.17
VSX2P58304 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.96□□□□□ -0.17
VSX2P58304 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.96□□□□□ -0.17
VSX2P58304 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.96□□□□□ -0.17
VSX2P58304 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.96□□□□□ -0.17
VSX2P58304 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.96□□□□□ -0.17
VSX2P58304 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.96□□□□□ -0.17
VSX2P58304 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms