Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN8P56748 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CLDN8P56748 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN8P56748 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 AL136309.1-201ENST00000403917 691 ntBASIC13.84□□□□□ -0.19
CLDN8P56748 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN8P56748 RN7SL837P-201ENST00000463010 287 ntBASIC13.84□□□□□ -0.19
CLDN8P56748 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN8P56748 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN8P56748 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN8P56748 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN8P56748 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN8P56748 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 AC015936.2-201ENST00000593177 259 ntBASIC13.84□□□□□ -0.19
CLDN8P56748 AL358472.3-201ENST00000608147 415 ntBASIC13.84□□□□□ -0.19
CLDN8P56748 AC006453.4-201ENST00000636949 1252 ntBASIC13.84□□□□□ -0.19
CLDN8P56748 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN8P56748 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN8P56748 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN8P56748 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN8P56748 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN8P56748 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN8P56748 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
CLDN8P56748 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN8P56748 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN8P56748 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.83□□□□□ -0.19
CLDN8P56748 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN8P56748 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.83□□□□□ -0.19
CLDN8P56748 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN8P56748 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CLDN8P56748 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CLDN8P56748 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 PTENP1-202ENST00000532280 3996 ntBASIC13.83□□□□□ -0.2
CLDN8P56748 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CLDN8P56748 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.83□□□□□ -0.2
CLDN8P56748 FAM197Y7-201ENST00000432892 766 ntBASIC13.83□□□□□ -0.2
CLDN8P56748 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.83□□□□□ -0.2
CLDN8P56748 COX5BP1-201ENST00000507622 393 ntBASIC13.83□□□□□ -0.2
CLDN8P56748 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN8P56748 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.83□□□□□ -0.2
CLDN8P56748 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.83□□□□□ -0.2
CLDN8P56748 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN8P56748 AC073413.1-201ENST00000603927 732 ntBASIC13.83□□□□□ -0.2
CLDN8P56748 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN8P56748 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CLDN8P56748 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CLDN8P56748 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
CLDN8P56748 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms