Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.93□□□□□ -0.18
CLDN6P56747 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN6P56747 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN6P56747 AC011247.3-201ENST00000603297 438 ntBASIC13.93□□□□□ -0.18
CLDN6P56747 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 KRT8P28-201ENST00000433288 1390 ntBASIC13.93□□□□□ -0.18
CLDN6P56747 AL136172.1-201ENST00000598590 1394 ntBASIC13.93□□□□□ -0.18
CLDN6P56747 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN6P56747 AC099063.4-201ENST00000641099 1602 ntBASIC13.93□□□□□ -0.18
CLDN6P56747 OR2I1P-209ENST00000641730 5365 ntBASIC13.93□□□□□ -0.18
CLDN6P56747 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 AL109954.1-202ENST00000564051 2148 ntBASIC13.93□□□□□ -0.18
CLDN6P56747 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN6P56747 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLDN6P56747 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN6P56747 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN6P56747 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN6P56747 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN6P56747 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CLDN6P56747 AC006504.5-208ENST00000588784 2401 ntBASIC13.92□□□□□ -0.18
CLDN6P56747 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLDN6P56747 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN6P56747 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CLDN6P56747 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN6P56747 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDN6P56747 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.92□□□□□ -0.18
CLDN6P56747 AL139008.1-201ENST00000437894 228 ntBASIC13.92□□□□□ -0.18
CLDN6P56747 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN6P56747 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.92□□□□□ -0.18
CLDN6P56747 DPY19L2P5-201ENST00000456300 331 ntBASIC13.92□□□□□ -0.18
CLDN6P56747 AC027237.1-201ENST00000560942 655 ntBASIC13.92□□□□□ -0.18
CLDN6P56747 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN6P56747 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CLDN6P56747 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN6P56747 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN6P56747 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN6P56747 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN6P56747 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDN6P56747 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN6P56747 SBF1P1-201ENST00000444527 5631 ntBASIC13.92□□□□□ -0.18
CLDN6P56747 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN6P56747 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CLDN6P56747 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN6P56747 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN6P56747 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
CLDN6P56747 TNRC18P2-201ENST00000417666 2714 ntBASIC13.91□□□□□ -0.18
CLDN6P56747 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLDN6P56747 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDN6P56747 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC13.91□□□□□ -0.18
CLDN6P56747 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CLDN6P56747 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.91□□□□□ -0.18
CLDN6P56747 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms