Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
PMS1P54277 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.99■□□□□ 0.15
PMS1P54277 AL008718.2-201ENST00000609206 1313 ntBASIC15.99■□□□□ 0.15
PMS1P54277 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.99■□□□□ 0.15
PMS1P54277 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.99■□□□□ 0.15
PMS1P54277 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PMS1P54277 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 KRT43P-201ENST00000434019 910 ntBASIC15.99■□□□□ 0.15
PMS1P54277 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.99■□□□□ 0.15
PMS1P54277 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.99■□□□□ 0.15
PMS1P54277 SNX29P1-201ENST00000548357 1007 ntBASIC15.99■□□□□ 0.15
PMS1P54277 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
PMS1P54277 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.99■□□□□ 0.15
PMS1P54277 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.99■□□□□ 0.15
PMS1P54277 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.99■□□□□ 0.15
PMS1P54277 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.99■□□□□ 0.15
PMS1P54277 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
PMS1P54277 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PMS1P54277 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
PMS1P54277 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.99■□□□□ 0.15
PMS1P54277 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMS1P54277 AC244394.1-201ENST00000435000 1665 ntBASIC15.99■□□□□ 0.15
PMS1P54277 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.98■□□□□ 0.15
PMS1P54277 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
PMS1P54277 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 AL928654.5-201ENST00000624831 2501 ntBASIC15.98■□□□□ 0.15
PMS1P54277 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.98■□□□□ 0.15
PMS1P54277 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.98■□□□□ 0.15
PMS1P54277 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PMS1P54277 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.98■□□□□ 0.15
PMS1P54277 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 AL157407.1-201ENST00000435784 904 ntBASIC15.98■□□□□ 0.15
PMS1P54277 COX20P2-201ENST00000452636 358 ntBASIC15.98■□□□□ 0.15
PMS1P54277 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.98■□□□□ 0.15
PMS1P54277 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.98■□□□□ 0.15
PMS1P54277 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.98■□□□□ 0.15
PMS1P54277 AC005225.4-201ENST00000557330 545 ntBASIC15.98■□□□□ 0.15
PMS1P54277 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PMS1P54277 DUX4L46-201ENST00000566845 751 ntBASIC15.98■□□□□ 0.15
PMS1P54277 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.98■□□□□ 0.15
PMS1P54277 AC009955.4-201ENST00000597192 544 ntBASIC15.98■□□□□ 0.15
PMS1P54277 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.98■□□□□ 0.15
PMS1P54277 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PMS1P54277 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PMS1P54277 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.98■□□□□ 0.15
PMS1P54277 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PMS1P54277 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 AL365181.3-201ENST00000605886 3222 ntBASIC15.98■□□□□ 0.15
PMS1P54277 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMS1P54277 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.97■□□□□ 0.15
PMS1P54277 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PMS1P54277 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.97■□□□□ 0.15
PMS1P54277 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.97■□□□□ 0.15
PMS1P54277 AL023775.1-201ENST00000454907 1746 ntBASIC15.97■□□□□ 0.15
PMS1P54277 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.97■□□□□ 0.15
PMS1P54277 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms