Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.93□□□□□ -0.34
SLC25A1P53007 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SLC25A1P53007 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.93□□□□□ -0.34
SLC25A1P53007 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 AC010141.1-201ENST00000411585 623 ntBASIC12.93□□□□□ -0.34
SLC25A1P53007 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.93□□□□□ -0.34
SLC25A1P53007 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 CRB3P1-201ENST00000449338 276 ntBASIC12.93□□□□□ -0.34
SLC25A1P53007 AL590640.2-201ENST00000457038 527 ntBASIC12.93□□□□□ -0.34
SLC25A1P53007 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.93□□□□□ -0.34
SLC25A1P53007 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SLC25A1P53007 SLC25A47P1-201ENST00000531577 414 ntBASIC12.93□□□□□ -0.34
SLC25A1P53007 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.93□□□□□ -0.34
SLC25A1P53007 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.93□□□□□ -0.34
SLC25A1P53007 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.93□□□□□ -0.34
SLC25A1P53007 MIR4745-201ENST00000577608 62 ntBASIC12.93□□□□□ -0.34
SLC25A1P53007 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.93□□□□□ -0.34
SLC25A1P53007 AL358472.3-201ENST00000608147 415 ntBASIC12.93□□□□□ -0.34
SLC25A1P53007 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 AC006453.4-201ENST00000636949 1252 ntBASIC12.93□□□□□ -0.34
SLC25A1P53007 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.93□□□□□ -0.34
SLC25A1P53007 AC138969.2-201ENST00000532739 9932 ntBASIC12.93□□□□□ -0.34
SLC25A1P53007 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.93□□□□□ -0.34
SLC25A1P53007 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.93□□□□□ -0.34
SLC25A1P53007 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.93□□□□□ -0.34
SLC25A1P53007 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.93□□□□□ -0.34
SLC25A1P53007 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC25A1P53007 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SLC25A1P53007 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SLC25A1P53007 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.92□□□□□ -0.34
SLC25A1P53007 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
SLC25A1P53007 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SLC25A1P53007 AC087386.2-201ENST00000623212 4637 ntBASIC12.92□□□□□ -0.34
SLC25A1P53007 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 FAM197Y7-201ENST00000432892 766 ntBASIC12.92□□□□□ -0.34
SLC25A1P53007 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 COX5BP1-201ENST00000507622 393 ntBASIC12.92□□□□□ -0.34
SLC25A1P53007 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.92□□□□□ -0.34
SLC25A1P53007 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.92□□□□□ -0.34
SLC25A1P53007 AC073413.1-201ENST00000603927 732 ntBASIC12.92□□□□□ -0.34
SLC25A1P53007 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
SLC25A1P53007 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC25A1P53007 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SLC25A1P53007 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SLC25A1P53007 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SLC25A1P53007 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SLC25A1P53007 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC25A1P53007 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.91□□□□□ -0.34
SLC25A1P53007 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.91□□□□□ -0.34
SLC25A1P53007 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC25A1P53007 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SLC25A1P53007 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC25A1P53007 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms