Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RNF144AP50876 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF144AP50876 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF144AP50876 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF144AP50876 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.63□□□□□ -0.23
RNF144AP50876 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
RNF144AP50876 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RNF144AP50876 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 CTBP2P5-201ENST00000454986 1264 ntBASIC13.63□□□□□ -0.23
RNF144AP50876 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 AC007688.1-201ENST00000475592 759 ntBASIC13.63□□□□□ -0.23
RNF144AP50876 GCOM2-201ENST00000509133 1104 ntBASIC13.63□□□□□ -0.23
RNF144AP50876 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.63□□□□□ -0.23
RNF144AP50876 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.63□□□□□ -0.23
RNF144AP50876 KRT17P8-201ENST00000540749 863 ntBASIC13.63□□□□□ -0.23
RNF144AP50876 HILS1-202ENST00000545329 423 ntBASIC13.63□□□□□ -0.23
RNF144AP50876 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.63□□□□□ -0.23
RNF144AP50876 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.63□□□□□ -0.23
RNF144AP50876 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 AL603764.1-201ENST00000636452 321 ntBASIC13.63□□□□□ -0.23
RNF144AP50876 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.63□□□□□ -0.23
RNF144AP50876 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF144AP50876 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF144AP50876 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
RNF144AP50876 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF144AP50876 AC005252.3-201ENST00000623855 2258 ntBASIC13.62□□□□□ -0.23
RNF144AP50876 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF144AP50876 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RNF144AP50876 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 LINC02486-201ENST00000604157 3000 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms