Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CENPAP49450 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.34□□□□□ -0.27
CENPAP49450 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.34□□□□□ -0.27
CENPAP49450 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 AC092135.3-201ENST00000624151 1846 ntBASIC13.34□□□□□ -0.27
CENPAP49450 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CENPAP49450 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CENPAP49450 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
CENPAP49450 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.33□□□□□ -0.27
CENPAP49450 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CENPAP49450 AL391825.1-201ENST00000457671 1364 ntBASIC13.33□□□□□ -0.27
CENPAP49450 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CENPAP49450 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.33□□□□□ -0.27
CENPAP49450 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CENPAP49450 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.33□□□□□ -0.27
CENPAP49450 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.33□□□□□ -0.28
CENPAP49450 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CENPAP49450 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CENPAP49450 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.33□□□□□ -0.28
CENPAP49450 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.33□□□□□ -0.28
CENPAP49450 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.33□□□□□ -0.28
CENPAP49450 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.33□□□□□ -0.28
CENPAP49450 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.33□□□□□ -0.28
CENPAP49450 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CENPAP49450 AC098850.1-201ENST00000419919 790 ntBASIC13.33□□□□□ -0.28
CENPAP49450 AC007969.1-201ENST00000433675 447 ntBASIC13.33□□□□□ -0.28
CENPAP49450 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.33□□□□□ -0.28
CENPAP49450 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.33□□□□□ -0.28
CENPAP49450 SPTLC1P1-201ENST00000447199 261 ntBASIC13.33□□□□□ -0.28
CENPAP49450 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.33□□□□□ -0.28
CENPAP49450 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.33□□□□□ -0.28
CENPAP49450 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CENPAP49450 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.33□□□□□ -0.28
CENPAP49450 AC124283.3-201ENST00000570869 594 ntBASIC13.33□□□□□ -0.28
CENPAP49450 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.33□□□□□ -0.28
CENPAP49450 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CENPAP49450 CHCHD2P3-201ENST00000603038 451 ntBASIC13.33□□□□□ -0.28
CENPAP49450 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.33□□□□□ -0.28
CENPAP49450 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CENPAP49450 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CENPAP49450 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CENPAP49450 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
CENPAP49450 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CENPAP49450 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.33□□□□□ -0.28
CENPAP49450 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CENPAP49450 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.33□□□□□ -0.28
CENPAP49450 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.33□□□□□ -0.28
CENPAP49450 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CENPAP49450 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPAP49450 AL136172.1-201ENST00000598590 1394 ntBASIC13.32□□□□□ -0.28
CENPAP49450 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.32□□□□□ -0.28
CENPAP49450 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 AL356585.2-201ENST00000625078 2396 ntBASIC13.32□□□□□ -0.28
CENPAP49450 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.32□□□□□ -0.28
CENPAP49450 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.32□□□□□ -0.28
CENPAP49450 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.32□□□□□ -0.28
CENPAP49450 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CENPAP49450 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.32□□□□□ -0.28
CENPAP49450 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms