Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
KRT20P35900 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.95□□□□□ -0.18
KRT20P35900 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
KRT20P35900 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
KRT20P35900 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
KRT20P35900 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
KRT20P35900 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
KRT20P35900 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.95□□□□□ -0.18
KRT20P35900 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 TPM3P8-201ENST00000330554 643 ntBASIC13.95□□□□□ -0.18
KRT20P35900 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.95□□□□□ -0.18
KRT20P35900 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.95□□□□□ -0.18
KRT20P35900 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
KRT20P35900 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.95□□□□□ -0.18
KRT20P35900 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.95□□□□□ -0.18
KRT20P35900 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
KRT20P35900 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.95□□□□□ -0.18
KRT20P35900 AC106760.1-201ENST00000508690 800 ntBASIC13.95□□□□□ -0.18
KRT20P35900 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.95□□□□□ -0.18
KRT20P35900 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
KRT20P35900 DUX4L47-201ENST00000566374 394 ntBASIC13.95□□□□□ -0.18
KRT20P35900 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.95□□□□□ -0.18
KRT20P35900 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.95□□□□□ -0.18
KRT20P35900 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.95□□□□□ -0.18
KRT20P35900 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
KRT20P35900 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
KRT20P35900 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 AC099521.3-201ENST00000624251 2938 ntBASIC13.95□□□□□ -0.18
KRT20P35900 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
KRT20P35900 AC105206.1-202ENST00000314927 2368 ntBASIC13.95□□□□□ -0.18
KRT20P35900 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.95□□□□□ -0.18
KRT20P35900 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.95□□□□□ -0.18
KRT20P35900 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.94□□□□□ -0.18
KRT20P35900 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
KRT20P35900 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
KRT20P35900 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
KRT20P35900 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT20P35900 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
KRT20P35900 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.94□□□□□ -0.18
KRT20P35900 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.94□□□□□ -0.18
KRT20P35900 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT20P35900 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.94□□□□□ -0.18
KRT20P35900 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.94□□□□□ -0.18
KRT20P35900 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT20P35900 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
KRT20P35900 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
KRT20P35900 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 TMEM14DP-201ENST00000422205 345 ntBASIC13.94□□□□□ -0.18
KRT20P35900 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.94□□□□□ -0.18
KRT20P35900 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.94□□□□□ -0.18
KRT20P35900 AC016694.1-201ENST00000434179 700 ntBASIC13.94□□□□□ -0.18
KRT20P35900 EIF3FP3-201ENST00000434851 1086 ntBASIC13.94□□□□□ -0.18
KRT20P35900 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 AC234783.1-201ENST00000441761 496 ntBASIC13.94□□□□□ -0.18
KRT20P35900 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT20P35900 COL6A4P2-202ENST00000504443 2753 ntBASIC13.94□□□□□ -0.18
KRT20P35900 USP32P1-208ENST00000506594 1164 ntBASIC13.94□□□□□ -0.18
KRT20P35900 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.94□□□□□ -0.18
KRT20P35900 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.94□□□□□ -0.18
KRT20P35900 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
KRT20P35900 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.94□□□□□ -0.18
KRT20P35900 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
KRT20P35900 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
KRT20P35900 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT20P35900 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms