Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CHMP24386 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CHMP24386 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.69□□□□□ -0.22
CHMP24386 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.69□□□□□ -0.22
CHMP24386 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.69□□□□□ -0.22
CHMP24386 AC245100.3-201ENST00000441281 285 ntBASIC13.69□□□□□ -0.22
CHMP24386 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.69□□□□□ -0.22
CHMP24386 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.69□□□□□ -0.22
CHMP24386 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.69□□□□□ -0.22
CHMP24386 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
CHMP24386 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.69□□□□□ -0.22
CHMP24386 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.69□□□□□ -0.22
CHMP24386 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.69□□□□□ -0.22
CHMP24386 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.69□□□□□ -0.22
CHMP24386 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.69□□□□□ -0.22
CHMP24386 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CHMP24386 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CHMP24386 CICP16-201ENST00000502609 2813 ntBASIC13.69□□□□□ -0.22
CHMP24386 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
CHMP24386 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.69□□□□□ -0.22
CHMP24386 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CHMP24386 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CHMP24386 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CHMP24386 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CHMP24386 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.68□□□□□ -0.22
CHMP24386 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.68□□□□□ -0.22
CHMP24386 FAM21FP-201ENST00000426241 1131 ntBASIC13.68□□□□□ -0.22
CHMP24386 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.68□□□□□ -0.22
CHMP24386 FAM197Y7-201ENST00000432892 766 ntBASIC13.68□□□□□ -0.22
CHMP24386 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.68□□□□□ -0.22
CHMP24386 AC007274.1-201ENST00000439805 662 ntBASIC13.68□□□□□ -0.22
CHMP24386 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.68□□□□□ -0.22
CHMP24386 CSF2RBP1-201ENST00000447905 391 ntBASIC13.68□□□□□ -0.22
CHMP24386 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.68□□□□□ -0.22
CHMP24386 RNA5SP412-201ENST00000516234 123 ntBASIC13.68□□□□□ -0.22
CHMP24386 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CHMP24386 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.68□□□□□ -0.22
CHMP24386 AC023310.1-201ENST00000554836 735 ntBASIC13.68□□□□□ -0.22
CHMP24386 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.68□□□□□ -0.22
CHMP24386 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.68□□□□□ -0.22
CHMP24386 MIR4259-201ENST00000584466 101 ntBASIC13.68□□□□□ -0.22
CHMP24386 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CHMP24386 AC138951.2-201ENST00000623455 1161 ntBASIC13.68□□□□□ -0.22
CHMP24386 AC006453.4-201ENST00000636949 1252 ntBASIC13.68□□□□□ -0.22
CHMP24386 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.68□□□□□ -0.22
CHMP24386 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.68□□□□□ -0.22
CHMP24386 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.68□□□□□ -0.22
CHMP24386 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHMP24386 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CHMP24386 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.67□□□□□ -0.22
CHMP24386 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.67□□□□□ -0.22
CHMP24386 AC020910.6-201ENST00000623084 1459 ntBASIC13.67□□□□□ -0.22
CHMP24386 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.67□□□□□ -0.22
CHMP24386 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CHMP24386 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.67□□□□□ -0.22
CHMP24386 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms