Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 PEBP1P2-201ENST00000603980 558 ntBASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 NAMA-206ENST00000605377 509 ntTSL 5 BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 AC091951.1-201ENST00000512854 2465 ntBASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 AC067931.2-201ENST00000623655 2003 ntBASIC19.07■□□□□ 0.64
CSB-PGBD3P0DP91 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 AC012158.2-201ENST00000536546 354 ntBASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 THY1-209ENST00000580275 578 ntTSL 3 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 GAS7-216ENST00000583882 553 ntTSL 5 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 AP003392.6-201ENST00000607709 325 ntBASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSB-PGBD3P0DP91 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 COX20P1-201ENST00000366529 357 ntBASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 AC006987.1-201ENST00000413610 527 ntBASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 TREHP1-201ENST00000531328 465 ntBASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 AC145285.5-201ENST00000562217 361 ntBASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 AP001527.2-201ENST00000614441 631 ntBASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CSB-PGBD3P0DP91 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms