Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL139385.1-201ENST00000611744 3272 ntBASIC13.81□□□□□ -0.2
MT-ND1P03886 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
MT-ND1P03886 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
MT-ND1P03886 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.81□□□□□ -0.2
MT-ND1P03886 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.8□□□□□ -0.2
MT-ND1P03886 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
MT-ND1P03886 AC138969.2-201ENST00000532739 9932 ntBASIC13.8□□□□□ -0.2
MT-ND1P03886 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.8□□□□□ -0.2
MT-ND1P03886 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
MT-ND1P03886 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.8□□□□□ -0.2
MT-ND1P03886 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
MT-ND1P03886 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
MT-ND1P03886 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 RPL13AP25-201ENST00000484130 612 ntBASIC13.8□□□□□ -0.2
MT-ND1P03886 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.8□□□□□ -0.2
MT-ND1P03886 TPRX2P-201ENST00000535362 881 ntBASIC13.8□□□□□ -0.2
MT-ND1P03886 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
MT-ND1P03886 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.8□□□□□ -0.2
MT-ND1P03886 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.8□□□□□ -0.2
MT-ND1P03886 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
MT-ND1P03886 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
MT-ND1P03886 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
MT-ND1P03886 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.8□□□□□ -0.2
MT-ND1P03886 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
MT-ND1P03886 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 AC003102.2-201ENST00000589195 1469 ntBASIC13.8□□□□□ -0.2
MT-ND1P03886 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MT-ND1P03886 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
MT-ND1P03886 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.79□□□□□ -0.2
MT-ND1P03886 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
MT-ND1P03886 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.79□□□□□ -0.2
MT-ND1P03886 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
MT-ND1P03886 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
MT-ND1P03886 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
MT-ND1P03886 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.79□□□□□ -0.2
MT-ND1P03886 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
MT-ND1P03886 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.79□□□□□ -0.2
MT-ND1P03886 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.79□□□□□ -0.2
MT-ND1P03886 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.79□□□□□ -0.2
MT-ND1P03886 MEP1AP4-201ENST00000423244 1087 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 BASP1P1-201ENST00000430708 665 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.79□□□□□ -0.2
MT-ND1P03886 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 VDAC1P7-201ENST00000462417 847 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 DOC2GP-202ENST00000514950 1163 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.79□□□□□ -0.2
MT-ND1P03886 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
MT-ND1P03886 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.79□□□□□ -0.2
MT-ND1P03886 AC023310.3-201ENST00000557027 670 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 AC100756.1-201ENST00000562736 682 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 DUX4L47-201ENST00000566374 394 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 AC138749.3-201ENST00000567691 622 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.79□□□□□ -0.2
MT-ND1P03886 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.79□□□□□ -0.2
MT-ND1P03886 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 AC116165.1-201ENST00000611806 668 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms