Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 STRCP1-201ENST00000509801 5328 ntBASIC13.5□□□□□ -0.25
IDH3BO43837 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IDH3BO43837 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.5□□□□□ -0.25
IDH3BO43837 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
IDH3BO43837 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
IDH3BO43837 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.5□□□□□ -0.25
IDH3BO43837 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IDH3BO43837 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IDH3BO43837 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.5□□□□□ -0.25
IDH3BO43837 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
IDH3BO43837 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
IDH3BO43837 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.5□□□□□ -0.25
IDH3BO43837 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IDH3BO43837 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.5□□□□□ -0.25
IDH3BO43837 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.49□□□□□ -0.25
IDH3BO43837 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.49□□□□□ -0.25
IDH3BO43837 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
IDH3BO43837 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.49□□□□□ -0.25
IDH3BO43837 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
IDH3BO43837 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
IDH3BO43837 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
IDH3BO43837 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
IDH3BO43837 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.49□□□□□ -0.25
IDH3BO43837 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.49□□□□□ -0.25
IDH3BO43837 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.49□□□□□ -0.25
IDH3BO43837 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.49□□□□□ -0.25
IDH3BO43837 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.49□□□□□ -0.25
IDH3BO43837 AC104596.2-201ENST00000512793 793 ntBASIC13.49□□□□□ -0.25
IDH3BO43837 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.49□□□□□ -0.25
IDH3BO43837 AC023310.3-201ENST00000557027 670 ntBASIC13.49□□□□□ -0.25
IDH3BO43837 AC100756.1-201ENST00000562736 682 ntBASIC13.49□□□□□ -0.25
IDH3BO43837 AC120045.2-201ENST00000567334 178 ntBASIC13.49□□□□□ -0.25
IDH3BO43837 AC138749.3-201ENST00000567691 622 ntBASIC13.49□□□□□ -0.25
IDH3BO43837 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.49□□□□□ -0.25
IDH3BO43837 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.49□□□□□ -0.25
IDH3BO43837 AL390955.2-201ENST00000603032 514 ntBASIC13.49□□□□□ -0.25
IDH3BO43837 AC116165.1-201ENST00000611806 668 ntBASIC13.49□□□□□ -0.25
IDH3BO43837 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.49□□□□□ -0.25
IDH3BO43837 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
IDH3BO43837 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
IDH3BO43837 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 FP325330.2-201ENST00000624219 5630 ntBASIC13.49□□□□□ -0.25
IDH3BO43837 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 INTS4P2-202ENST00000614726 2019 ntBASIC13.49□□□□□ -0.25
IDH3BO43837 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.49□□□□□ -0.25
IDH3BO43837 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 AC106818.1-201ENST00000623223 3242 ntBASIC13.49□□□□□ -0.25
IDH3BO43837 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IDH3BO43837 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
IDH3BO43837 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.48□□□□□ -0.25
IDH3BO43837 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
IDH3BO43837 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IDH3BO43837 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IDH3BO43837 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.48□□□□□ -0.25
IDH3BO43837 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.48□□□□□ -0.25
IDH3BO43837 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.48□□□□□ -0.25
IDH3BO43837 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
IDH3BO43837 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.48□□□□□ -0.25
IDH3BO43837 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.48□□□□□ -0.25
IDH3BO43837 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
IDH3BO43837 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IDH3BO43837 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
IDH3BO43837 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
IDH3BO43837 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IDH3BO43837 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms