Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.97□□□□□ -0.33
TRAF3IP2O43734 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 FAM58BP-201ENST00000439056 645 ntBASIC12.97□□□□□ -0.33
TRAF3IP2O43734 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 RN7SL560P-201ENST00000577943 264 ntBASIC12.97□□□□□ -0.33
TRAF3IP2O43734 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 AC126335.2-201ENST00000623362 4637 ntBASIC12.97□□□□□ -0.33
TRAF3IP2O43734 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 AC012441.2-201ENST00000444843 739 ntBASIC12.96□□□□□ -0.33
TRAF3IP2O43734 RPL13AP20-201ENST00000459725 609 ntBASIC12.96□□□□□ -0.33
TRAF3IP2O43734 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 RBM8B-201ENST00000555532 525 ntBASIC12.96□□□□□ -0.33
TRAF3IP2O43734 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 AL008721.1-201ENST00000609964 604 ntBASIC12.96□□□□□ -0.33
TRAF3IP2O43734 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms