Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
PAX4O43316 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.53□□□□□ -0.72
PAX4O43316 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC10.53□□□□□ -0.72
PAX4O43316 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC10.53□□□□□ -0.72
PAX4O43316 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 GSAP-205ENST00000430584 600 ntTSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC10.53□□□□□ -0.72
PAX4O43316 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 FTH1P14-201ENST00000482930 551 ntBASIC10.53□□□□□ -0.72
PAX4O43316 FTLP10-202ENST00000505798 471 ntBASIC10.53□□□□□ -0.72
PAX4O43316 RNA5SP486-201ENST00000515961 83 ntBASIC10.53□□□□□ -0.72
PAX4O43316 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC10.53□□□□□ -0.72
PAX4O43316 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC10.53□□□□□ -0.72
PAX4O43316 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC10.53□□□□□ -0.72
PAX4O43316 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC10.53□□□□□ -0.72
PAX4O43316 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC10.53□□□□□ -0.72
PAX4O43316 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 ETV2-208ENST00000621247 941 ntTSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 AC007191.1-201ENST00000623179 2995 ntBASIC10.53□□□□□ -0.72
PAX4O43316 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 AL035252.4-201ENST00000624174 288 ntBASIC10.53□□□□□ -0.72
PAX4O43316 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
PAX4O43316 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 USO1-201ENST00000264904 4135 ntTSL 2 BASIC10.53□□□□□ -0.72
PAX4O43316 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
PAX4O43316 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.53□□□□□ -0.72
PAX4O43316 AL390755.1-201ENST00000623716 2027 ntBASIC10.53□□□□□ -0.72
PAX4O43316 FKBP4P6-201ENST00000457486 1332 ntBASIC10.53□□□□□ -0.72
PAX4O43316 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.53□□□□□ -0.72
PAX4O43316 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.53□□□□□ -0.72
PAX4O43316 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC10.53□□□□□ -0.72
PAX4O43316 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
PAX4O43316 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
PAX4O43316 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
PAX4O43316 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
PAX4O43316 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC10.52□□□□□ -0.72
PAX4O43316 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
PAX4O43316 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC10.52□□□□□ -0.72
PAX4O43316 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.52□□□□□ -0.72
PAX4O43316 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
PAX4O43316 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.52□□□□□ -0.72
PAX4O43316 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PAX4O43316 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
PAX4O43316 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PAX4O43316 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
PAX4O43316 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PAX4O43316 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PAX4O43316 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.52□□□□□ -0.73
PAX4O43316 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
PAX4O43316 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PAX4O43316 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PAX4O43316 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PAX4O43316 AC092933.1-201ENST00000393644 945 ntBASIC10.52□□□□□ -0.73
PAX4O43316 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
PAX4O43316 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC10.52□□□□□ -0.73
PAX4O43316 MPV17-205ENST00000402310 906 ntTSL 5 BASIC10.52□□□□□ -0.73
PAX4O43316 BOLA2P3-201ENST00000404566 256 ntBASIC10.52□□□□□ -0.73
PAX4O43316 MTND2P9-201ENST00000422293 931 ntBASIC10.52□□□□□ -0.73
PAX4O43316 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PAX4O43316 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC10.52□□□□□ -0.73
PAX4O43316 RSL24D1P2-201ENST00000445584 366 ntBASIC10.52□□□□□ -0.73
PAX4O43316 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC10.52□□□□□ -0.73
PAX4O43316 RPL8-205ENST00000527914 551 ntTSL 3 BASIC10.52□□□□□ -0.73
PAX4O43316 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC10.52□□□□□ -0.73
PAX4O43316 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC10.52□□□□□ -0.73
PAX4O43316 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
PAX4O43316 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC10.52□□□□□ -0.73
PAX4O43316 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC10.52□□□□□ -0.73
PAX4O43316 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms