Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.78□□□□□ -0.68
NACAE9PAV3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC10.78□□□□□ -0.68
NACAE9PAV3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.78□□□□□ -0.68
NACAE9PAV3 Six3os1_5.1-201ENST00000611000 271 ntBASIC10.78□□□□□ -0.68
NACAE9PAV3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
NACAE9PAV3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.77□□□□□ -0.68
NACAE9PAV3 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
NACAE9PAV3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
NACAE9PAV3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC10.77□□□□□ -0.68
NACAE9PAV3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.68
NACAE9PAV3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
NACAE9PAV3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC10.77□□□□□ -0.68
NACAE9PAV3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
NACAE9PAV3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.77□□□□□ -0.69
NACAE9PAV3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC10.77□□□□□ -0.69
NACAE9PAV3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.77□□□□□ -0.69
NACAE9PAV3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC10.77□□□□□ -0.69
NACAE9PAV3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC10.77□□□□□ -0.69
NACAE9PAV3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.77□□□□□ -0.69
NACAE9PAV3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
NACAE9PAV3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC10.77□□□□□ -0.69
NACAE9PAV3 AC104989.1-201ENST00000519711 778 ntBASIC10.77□□□□□ -0.69
NACAE9PAV3 AC068587.3-201ENST00000526613 355 ntBASIC10.77□□□□□ -0.69
NACAE9PAV3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.77□□□□□ -0.69
NACAE9PAV3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC10.77□□□□□ -0.69
NACAE9PAV3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
NACAE9PAV3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC10.77□□□□□ -0.69
NACAE9PAV3 MIR4259-201ENST00000584466 101 ntBASIC10.77□□□□□ -0.69
NACAE9PAV3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
NACAE9PAV3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
NACAE9PAV3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
NACAE9PAV3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
NACAE9PAV3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
NACAE9PAV3 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC10.77□□□□□ -0.69
NACAE9PAV3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 AL645937.2-201ENST00000396808 931 ntBASIC10.77□□□□□ -0.69
NACAE9PAV3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC10.77□□□□□ -0.69
NACAE9PAV3 TPT1P11-201ENST00000458482 498 ntBASIC10.77□□□□□ -0.69
NACAE9PAV3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC10.77□□□□□ -0.69
NACAE9PAV3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC10.77□□□□□ -0.69
NACAE9PAV3 AC244669.2-201ENST00000612320 853 ntBASIC10.77□□□□□ -0.69
NACAE9PAV3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NACAE9PAV3 DISP2-201ENST00000267889 12614 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC10.76□□□□□ -0.69
NACAE9PAV3 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC10.76□□□□□ -0.69
NACAE9PAV3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.76□□□□□ -0.69
NACAE9PAV3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.76□□□□□ -0.69
NACAE9PAV3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.76□□□□□ -0.69
NACAE9PAV3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.76□□□□□ -0.69
NACAE9PAV3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC10.76□□□□□ -0.69
NACAE9PAV3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
NACAE9PAV3 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
NACAE9PAV3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC10.76□□□□□ -0.69
NACAE9PAV3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NACAE9PAV3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
NACAE9PAV3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
NACAE9PAV3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.76□□□□□ -0.69
NACAE9PAV3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC10.76□□□□□ -0.69
NACAE9PAV3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC10.76□□□□□ -0.69
NACAE9PAV3 PTP4A1P2-201ENST00000546033 454 ntBASIC10.76□□□□□ -0.69
NACAE9PAV3 AC092552.1-201ENST00000547243 906 ntBASIC10.76□□□□□ -0.69
NACAE9PAV3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms