Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 TP73-207ENST00000378290 1831 ntTSL 2 BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 AL590824.1-201ENST00000403828 1349 ntBASIC17.58■□□□□ 0.41
RGPD3A6NKT7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 RBMX2P5-201ENST00000424312 969 ntBASIC17.58■□□□□ 0.41
RGPD3A6NKT7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 NME1-209ENST00000511355 1645 ntTSL 5 BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 AC133555.4-201ENST00000569081 152 ntBASIC17.58■□□□□ 0.41
RGPD3A6NKT7 AC091691.1-201ENST00000583587 1018 ntBASIC17.58■□□□□ 0.41
RGPD3A6NKT7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.58■□□□□ 0.41
RGPD3A6NKT7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 AP003680.1-201ENST00000598970 3660 ntBASIC17.58■□□□□ 0.4
RGPD3A6NKT7 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 AL109954.3-201ENST00000615088 558 ntBASIC17.58■□□□□ 0.4
RGPD3A6NKT7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
RGPD3A6NKT7 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 AL365203.3-201ENST00000609742 2057 ntBASIC17.57■□□□□ 0.4
RGPD3A6NKT7 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 RN7SL47P-201ENST00000488710 299 ntBASIC17.57■□□□□ 0.4
RGPD3A6NKT7 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
RGPD3A6NKT7 AC018442.1-201ENST00000421439 2061 ntBASIC17.57■□□□□ 0.4
RGPD3A6NKT7 KRT8P38-201ENST00000441370 1430 ntBASIC17.56■□□□□ 0.4
RGPD3A6NKT7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 RN7SL646P-201ENST00000492969 297 ntBASIC17.56■□□□□ 0.4
RGPD3A6NKT7 MIR4309-201ENST00000582498 83 ntBASIC17.56■□□□□ 0.4
RGPD3A6NKT7 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 PCDH8P1-201ENST00000428983 2773 ntBASIC17.56■□□□□ 0.4
RGPD3A6NKT7 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 Z84721.1-201ENST00000438841 372 ntBASIC17.56■□□□□ 0.4
RGPD3A6NKT7 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 RPSAP16-201ENST00000447583 821 ntBASIC17.56■□□□□ 0.4
RGPD3A6NKT7 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RGPD3A6NKT7 AC137723.2-201ENST00000623540 398 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms