Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 MIR4741-201ENST00000579822 90 ntBASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 MIR4783-201ENST00000580343 82 ntBASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC162PA2VCL2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 DUX4L46-201ENST00000566845 751 ntBASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 MIR4259-201ENST00000584466 101 ntBASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 AC132192.2-201ENST00000596206 1147 ntBASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 TCAF1P1-201ENST00000414990 2232 ntBASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms