Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
PCDHB13Q9Y5F0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB13Q9Y5F0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB13Q9Y5F0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB13Q9Y5F0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
PCDHB13Q9Y5F0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHB13Q9Y5F0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHB13Q9Y5F0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PCDHB13Q9Y5F0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB13Q9Y5F0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB13Q9Y5F0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB13Q9Y5F0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 TCEAL1-202ENST00000372625 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 AL355994.2-201ENST00000447882 704 ntBASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 AC022210.1-201ENST00000449856 793 ntBASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 HOMER2P2-201ENST00000451621 847 ntBASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 AC025437.4-201ENST00000522975 681 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 SNX29P1-201ENST00000548357 1007 ntBASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 MIR4683-201ENST00000579659 81 ntBASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 AC008825.2-201ENST00000603374 718 ntBASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 AC017083.2-201ENST00000608069 979 ntBASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 AC005066.1-201ENST00000613582 1007 ntBASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 AP001002.3-201ENST00000623482 206 ntBASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 KRT8P4-201ENST00000509735 1454 ntBASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB13Q9Y5F0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHB13Q9Y5F0 CNN2P10-201ENST00000443067 918 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms