Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 HSPA7-201ENST00000445535 1927 ntBASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 AC007389.4-201ENST00000454674 793 ntBASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 FTLP10-202ENST00000505798 471 ntBASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 RN7SL48P-201ENST00000579283 293 ntBASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 CLUHP2-201ENST00000426660 1303 ntBASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR1DQ9Y2S0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 AC106760.1-201ENST00000508690 800 ntBASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 AC131206.1-201ENST00000538078 1211 ntBASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 AC138761.1-201ENST00000584393 385 ntBASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 AC138466.3-201ENST00000619983 221 ntBASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
POLR1DQ9Y2S0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
POLR1DQ9Y2S0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
POLR1DQ9Y2S0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
POLR1DQ9Y2S0 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
POLR1DQ9Y2S0 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
POLR1DQ9Y2S0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
POLR1DQ9Y2S0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.08□□□□□ -0.31
POLR1DQ9Y2S0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
POLR1DQ9Y2S0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms