Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC215219.1-201ENST00000400706 1817 ntBASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AL662890.1-201ENST00000396818 632 ntBASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AC132192.2-201ENST00000596206 1147 ntBASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AC009955.4-201ENST00000597192 544 ntBASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AC008825.2-201ENST00000603374 718 ntBASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AC010326.4-201ENST00000604665 891 ntBASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AL021578.1-201ENST00000613646 709 ntBASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 OR2I1P-209ENST00000641730 5365 ntBASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AC138028.6-201ENST00000616106 1482 ntBASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 MIR663B-201ENST00000408361 115 ntBASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 FXNP2-201ENST00000411625 547 ntBASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 HSPB1P2-201ENST00000448722 546 ntBASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AKR7A2P1-201ENST00000460134 915 ntBASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 DUX4L46-201ENST00000566845 751 ntBASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AC016629.1-201ENST00000596579 586 ntBASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AL096828.3-201ENST00000615354 462 ntBASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AC117489.1-201ENST00000625169 3217 ntBASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CUEDC1Q9NWM3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.15□□□□□ -0.15
CUEDC1Q9NWM3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CUEDC1Q9NWM3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms