Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 POM121L8P-201ENST00000417732 1281 ntBASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 POM121L9P-203ENST00000441984 1285 ntBASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 SORD2P-201ENST00000558556 1069 ntBASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 AC004466.1-201ENST00000599515 1080 ntBASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 CHCHD2P3-201ENST00000603038 451 ntBASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 AC138466.3-201ENST00000619983 221 ntBASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 CLUHP2-201ENST00000426660 1303 ntBASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
POLR2J2Q9GZM3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 UGT1A2P-201ENST00000454886 866 ntBASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 API5-211ENST00000534695 560 ntTSL 5 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 AC140912.1-201ENST00000577171 1054 ntBASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 AP000593.2-201ENST00000542775 1433 ntBASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR2J2Q9GZM3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
POLR2J2Q9GZM3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.52□□□□□ -0.24
POLR2J2Q9GZM3 AL356585.2-201ENST00000625078 2396 ntBASIC13.52□□□□□ -0.24
POLR2J2Q9GZM3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
POLR2J2Q9GZM3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.52□□□□□ -0.24
POLR2J2Q9GZM3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
POLR2J2Q9GZM3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
POLR2J2Q9GZM3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.52□□□□□ -0.24
POLR2J2Q9GZM3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR2J2Q9GZM3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms