Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC073869.1-201ENST00000415574 2762 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC139712.1-201ENST00000378256 1875 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 TLE1P1-201ENST00000422965 589 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC078875.1-201ENST00000431907 724 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC234782.1-201ENST00000451950 919 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 MPRIPP1-201ENST00000452433 1089 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 RPS2P36-201ENST00000456516 831 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 RN7SL277P-201ENST00000481521 288 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 RN7SL67P-201ENST00000492147 296 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 SUPT4H1P2-201ENST00000501248 353 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 CFL1-206ENST00000527344 962 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AL161670.2-201ENST00000557650 1227 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 MIR3677-201ENST00000578964 60 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 MIR4754-201ENST00000582477 89 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 MIR4522-201ENST00000584932 87 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC009884.2-201ENST00000603110 324 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC087752.4-201ENST00000605911 462 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 AC073352.2-201ENST00000609385 439 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 CFTRP2-201ENST00000634304 199 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 NAP1L6-202ENST00000641404 1222 ntBASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-3Q9BYR4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms