Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CGREF1Q99674 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CGREF1Q99674 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.91□□□□□ -0.18
CGREF1Q99674 AC131212.3-201ENST00000624087 4219 ntBASIC13.91□□□□□ -0.18
CGREF1Q99674 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CGREF1Q99674 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CGREF1Q99674 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CGREF1Q99674 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.91□□□□□ -0.18
CGREF1Q99674 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.91□□□□□ -0.18
CGREF1Q99674 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.91□□□□□ -0.18
CGREF1Q99674 AC092552.1-201ENST00000547243 906 ntBASIC13.91□□□□□ -0.18
CGREF1Q99674 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.91□□□□□ -0.18
CGREF1Q99674 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.91□□□□□ -0.18
CGREF1Q99674 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.91□□□□□ -0.18
CGREF1Q99674 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.91□□□□□ -0.18
CGREF1Q99674 AC093726.1-201ENST00000608064 963 ntBASIC13.91□□□□□ -0.18
CGREF1Q99674 BX088702.1-201ENST00000610784 235 ntBASIC13.91□□□□□ -0.18
CGREF1Q99674 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.91□□□□□ -0.18
CGREF1Q99674 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CGREF1Q99674 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
CGREF1Q99674 SLC7A15P-201ENST00000424028 1363 ntBASIC13.91□□□□□ -0.18
CGREF1Q99674 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CGREF1Q99674 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.91□□□□□ -0.18
CGREF1Q99674 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CGREF1Q99674 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.91□□□□□ -0.18
CGREF1Q99674 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CGREF1Q99674 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CGREF1Q99674 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.91□□□□□ -0.18
CGREF1Q99674 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CGREF1Q99674 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CGREF1Q99674 AOC4P-203ENST00000566825 2289 ntBASIC13.9□□□□□ -0.18
CGREF1Q99674 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CGREF1Q99674 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 ACKR1-201ENST00000368121 1240 ntBASIC13.9□□□□□ -0.18
CGREF1Q99674 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.9□□□□□ -0.18
CGREF1Q99674 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.9□□□□□ -0.18
CGREF1Q99674 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.9□□□□□ -0.18
CGREF1Q99674 MIR1233-2-201ENST00000408138 82 ntBASIC13.9□□□□□ -0.18
CGREF1Q99674 MIR1233-1-201ENST00000408722 82 ntBASIC13.9□□□□□ -0.18
CGREF1Q99674 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.9□□□□□ -0.18
CGREF1Q99674 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.9□□□□□ -0.18
CGREF1Q99674 KRT18P25-201ENST00000508931 1278 ntBASIC13.9□□□□□ -0.18
CGREF1Q99674 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.9□□□□□ -0.18
CGREF1Q99674 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.9□□□□□ -0.18
CGREF1Q99674 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.9□□□□□ -0.18
CGREF1Q99674 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.9□□□□□ -0.18
CGREF1Q99674 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.9□□□□□ -0.18
CGREF1Q99674 AP001160.2-201ENST00000596071 487 ntBASIC13.9□□□□□ -0.18
CGREF1Q99674 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.9□□□□□ -0.18
CGREF1Q99674 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.9□□□□□ -0.18
CGREF1Q99674 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CGREF1Q99674 AC020910.5-201ENST00000623668 1865 ntBASIC13.9□□□□□ -0.18
CGREF1Q99674 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
CGREF1Q99674 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.9□□□□□ -0.18
CGREF1Q99674 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CGREF1Q99674 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CGREF1Q99674 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms