Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.19□□□□□ -0.14
PKP4Q99569 AC020910.6-201ENST00000623084 1459 ntBASIC14.19□□□□□ -0.14
PKP4Q99569 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 TUBB1P2-201ENST00000422712 1306 ntBASIC14.19□□□□□ -0.14
PKP4Q99569 TUBB1P1-201ENST00000503144 1300 ntBASIC14.19□□□□□ -0.14
PKP4Q99569 AL008718.2-201ENST00000609206 1313 ntBASIC14.19□□□□□ -0.14
PKP4Q99569 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.19□□□□□ -0.14
PKP4Q99569 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PKP4Q99569 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.19□□□□□ -0.14
PKP4Q99569 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.19□□□□□ -0.14
PKP4Q99569 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.19□□□□□ -0.14
PKP4Q99569 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
PKP4Q99569 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.19□□□□□ -0.14
PKP4Q99569 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.19□□□□□ -0.14
PKP4Q99569 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.19□□□□□ -0.14
PKP4Q99569 AC005586.2-201ENST00000563946 837 ntBASIC14.19□□□□□ -0.14
PKP4Q99569 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.19□□□□□ -0.14
PKP4Q99569 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.19□□□□□ -0.14
PKP4Q99569 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.19□□□□□ -0.14
PKP4Q99569 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.19□□□□□ -0.14
PKP4Q99569 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.19□□□□□ -0.14
PKP4Q99569 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 HSPA8P5-201ENST00000456928 2069 ntBASIC14.19□□□□□ -0.14
PKP4Q99569 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PKP4Q99569 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PKP4Q99569 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PKP4Q99569 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PKP4Q99569 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.19□□□□□ -0.14
PKP4Q99569 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.18□□□□□ -0.14
PKP4Q99569 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
PKP4Q99569 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PKP4Q99569 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
PKP4Q99569 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.18□□□□□ -0.14
PKP4Q99569 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.18□□□□□ -0.14
PKP4Q99569 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.18□□□□□ -0.14
PKP4Q99569 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PKP4Q99569 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PKP4Q99569 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 AL161932.2-201ENST00000435436 679 ntBASIC14.18□□□□□ -0.14
PKP4Q99569 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.18□□□□□ -0.14
PKP4Q99569 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.18□□□□□ -0.14
PKP4Q99569 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.18□□□□□ -0.14
PKP4Q99569 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PKP4Q99569 AC005962.1-201ENST00000584100 773 ntBASIC14.18□□□□□ -0.14
PKP4Q99569 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.18□□□□□ -0.14
PKP4Q99569 AC009884.2-201ENST00000603110 324 ntBASIC14.18□□□□□ -0.14
PKP4Q99569 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
PKP4Q99569 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms