Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 HLA-DMA-203ENST00000395305 777 ntBASIC14.81□□□□□ -0.04
PHOX2BQ99453 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 EIF2S2P5-201ENST00000457635 968 ntBASIC14.81□□□□□ -0.04
PHOX2BQ99453 AC063952.3-201ENST00000467756 308 ntBASIC14.81□□□□□ -0.04
PHOX2BQ99453 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 AC133552.4-201ENST00000576103 676 ntBASIC14.81□□□□□ -0.04
PHOX2BQ99453 MIR4313-201ENST00000580760 101 ntBASIC14.81□□□□□ -0.04
PHOX2BQ99453 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 AC009560.1-201ENST00000620208 434 ntBASIC14.81□□□□□ -0.04
PHOX2BQ99453 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 AP000593.2-201ENST00000542775 1433 ntBASIC14.81□□□□□ -0.04
PHOX2BQ99453 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 AL672207.1-201ENST00000328462 1570 ntBASIC14.81□□□□□ -0.04
PHOX2BQ99453 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 LINC01165-201ENST00000445190 1623 ntBASIC14.81□□□□□ -0.04
PHOX2BQ99453 CDY3P-201ENST00000454543 1618 ntBASIC14.81□□□□□ -0.04
PHOX2BQ99453 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 INE2-201ENST00000630399 1874 ntBASIC14.8□□□□□ -0.04
PHOX2BQ99453 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 AC010141.1-201ENST00000411585 623 ntBASIC14.8□□□□□ -0.04
PHOX2BQ99453 BANF1P3-201ENST00000412556 261 ntBASIC14.8□□□□□ -0.04
PHOX2BQ99453 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 AC092580.1-201ENST00000433998 658 ntBASIC14.8□□□□□ -0.04
PHOX2BQ99453 AC012441.2-201ENST00000444843 739 ntBASIC14.8□□□□□ -0.04
PHOX2BQ99453 RPSAP15-201ENST00000448168 861 ntBASIC14.8□□□□□ -0.04
PHOX2BQ99453 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 CHCHD2P2-201ENST00000503744 321 ntBASIC14.8□□□□□ -0.04
PHOX2BQ99453 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 AC112187.3-201ENST00000607844 408 ntBASIC14.8□□□□□ -0.04
PHOX2BQ99453 AC004466.2-201ENST00000614749 516 ntBASIC14.8□□□□□ -0.04
PHOX2BQ99453 AC011462.4-201ENST00000616866 449 ntBASIC14.8□□□□□ -0.04
PHOX2BQ99453 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 WASH7P-201ENST00000488147 1351 ntBASIC14.8□□□□□ -0.04
PHOX2BQ99453 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
PHOX2BQ99453 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PHOX2BQ99453 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms