Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3IPQ96QF0 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3IPQ96QF0 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 AC060814.4-201ENST00000594169 2163 ntBASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 AC025580.3-201ENST00000617932 1424 ntBASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3IPQ96QF0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 AC098831.1-202ENST00000438821 336 ntBASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 FDX1P1-201ENST00000449115 551 ntBASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB3IPQ96QF0 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 PCDHA6-201ENST00000378126 3267 ntBASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 AL359845.1-201ENST00000458202 1648 ntBASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 AC015819.3-201ENST00000624305 2674 ntBASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 AGGF1P10-201ENST00000635005 2191 ntBASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB3IPQ96QF0 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms