Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.09□□□□□ -0.47
GAFA1Q96PS6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 KRT18P36-201ENST00000411618 1276 ntBASIC12.09□□□□□ -0.47
GAFA1Q96PS6 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 AC106794.1-201ENST00000506935 792 ntBASIC12.09□□□□□ -0.47
GAFA1Q96PS6 AC003686.1-201ENST00000550956 1034 ntBASIC12.09□□□□□ -0.47
GAFA1Q96PS6 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 RN7SL163P-201ENST00000583100 276 ntBASIC12.09□□□□□ -0.47
GAFA1Q96PS6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 AC090164.2-201ENST00000611487 516 ntBASIC12.09□□□□□ -0.47
GAFA1Q96PS6 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.09□□□□□ -0.47
GAFA1Q96PS6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
GAFA1Q96PS6 AC018629.1-201ENST00000623381 1736 ntBASIC12.08□□□□□ -0.47
GAFA1Q96PS6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
GAFA1Q96PS6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
GAFA1Q96PS6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
GAFA1Q96PS6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 AC117489.1-201ENST00000625169 3217 ntBASIC12.08□□□□□ -0.48
GAFA1Q96PS6 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 DPM3-202ENST00000368399 517 ntBASIC12.08□□□□□ -0.48
GAFA1Q96PS6 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.08□□□□□ -0.48
GAFA1Q96PS6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 AC104073.2-201ENST00000453737 312 ntBASIC12.08□□□□□ -0.48
GAFA1Q96PS6 AC005740.2-201ENST00000511085 419 ntBASIC12.08□□□□□ -0.48
GAFA1Q96PS6 AC044849.1-201ENST00000519737 1188 ntBASIC12.08□□□□□ -0.48
GAFA1Q96PS6 PGAM1P5-201ENST00000548011 764 ntBASIC12.08□□□□□ -0.48
GAFA1Q96PS6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 MIR4538-201ENST00000581377 78 ntBASIC12.08□□□□□ -0.48
GAFA1Q96PS6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 AL022328.3-201ENST00000607943 679 ntBASIC12.08□□□□□ -0.48
GAFA1Q96PS6 AC021016.3-201ENST00000608367 477 ntBASIC12.08□□□□□ -0.48
GAFA1Q96PS6 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
GAFA1Q96PS6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms