Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC055811.4-201ENST00000624039 1754 ntBASIC11.11□□□□□ -0.63
AP1S3Q96PC3 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AC104457.1-201ENST00000401024 814 ntBASIC11.11□□□□□ -0.63
AP1S3Q96PC3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 HIST3H2BA-201ENST00000436555 524 ntBASIC11.11□□□□□ -0.63
AP1S3Q96PC3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 TPT1P11-201ENST00000458482 498 ntBASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AC025181.2-201ENST00000606994 802 ntBASIC11.11□□□□□ -0.63
AP1S3Q96PC3 MIR6069-201ENST00000620069 79 ntBASIC11.11□□□□□ -0.63
AP1S3Q96PC3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 KRT8P12-202ENST00000472924 1397 ntBASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AC152010.1-201ENST00000415779 2006 ntBASIC11.11□□□□□ -0.63
AP1S3Q96PC3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 IL9RP2-201ENST00000423948 1312 ntBASIC11.1□□□□□ -0.63
AP1S3Q96PC3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 TUB-202ENST00000305253 6420 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 AC015818.9-201ENST00000591705 4582 ntBASIC11.1□□□□□ -0.63
AP1S3Q96PC3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 KRT18P32-201ENST00000424695 1287 ntBASIC11.1□□□□□ -0.63
AP1S3Q96PC3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 TPM4P1-201ENST00000436100 807 ntBASIC11.1□□□□□ -0.63
AP1S3Q96PC3 MTND6P24-201ENST00000440466 518 ntBASIC11.1□□□□□ -0.63
AP1S3Q96PC3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 AC009078.2-202ENST00000463353 338 ntBASIC11.1□□□□□ -0.63
AP1S3Q96PC3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 ALG1L8P-201ENST00000533887 760 ntBASIC11.1□□□□□ -0.63
AP1S3Q96PC3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 AC003101.2-201ENST00000612557 442 ntBASIC11.1□□□□□ -0.63
AP1S3Q96PC3 AC106820.4-201ENST00000561847 5616 ntBASIC11.1□□□□□ -0.63
AP1S3Q96PC3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 AP001972.5-201ENST00000624624 2338 ntBASIC11.1□□□□□ -0.63
AP1S3Q96PC3 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
AP1S3Q96PC3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms