Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX27Q96L92 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX27Q96L92 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.65■□□□□ 0.1
SNX27Q96L92 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX27Q96L92 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX27Q96L92 AC098935.1-201ENST00000446057 611 ntBASIC15.65■□□□□ 0.1
SNX27Q96L92 ALG1L13P-202ENST00000519320 584 ntBASIC15.65■□□□□ 0.1
SNX27Q96L92 POU5F1P2-201ENST00000521750 823 ntBASIC15.65■□□□□ 0.1
SNX27Q96L92 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SNX27Q96L92 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 RTN3P1-201ENST00000536295 711 ntBASIC15.65■□□□□ 0.1
SNX27Q96L92 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SNX27Q96L92 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX27Q96L92 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC15.65■□□□□ 0.1
SNX27Q96L92 AC021016.3-201ENST00000608367 477 ntBASIC15.65■□□□□ 0.1
SNX27Q96L92 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.65■□□□□ 0.1
SNX27Q96L92 AC090386.2-201ENST00000623010 1039 ntBASIC15.65■□□□□ 0.1
SNX27Q96L92 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
SNX27Q96L92 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SNX27Q96L92 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX27Q96L92 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SNX27Q96L92 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX27Q96L92 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.65■□□□□ 0.1
SNX27Q96L92 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.65■□□□□ 0.1
SNX27Q96L92 AC011498.7-201ENST00000624986 2027 ntBASIC15.65■□□□□ 0.1
SNX27Q96L92 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX27Q96L92 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 LAP3P2-201ENST00000454686 1454 ntBASIC15.65■□□□□ 0.1
SNX27Q96L92 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 FAM45BP-202ENST00000592932 1624 ntBASIC15.65■□□□□ 0.1
SNX27Q96L92 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
SNX27Q96L92 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.64■□□□□ 0.09
SNX27Q96L92 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.64■□□□□ 0.09
SNX27Q96L92 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SNX27Q96L92 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.64■□□□□ 0.09
SNX27Q96L92 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.64■□□□□ 0.09
SNX27Q96L92 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.64■□□□□ 0.09
SNX27Q96L92 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SNX27Q96L92 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.64■□□□□ 0.09
SNX27Q96L92 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
SNX27Q96L92 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 AC092580.1-201ENST00000433998 658 ntBASIC15.64■□□□□ 0.09
SNX27Q96L92 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.64■□□□□ 0.09
SNX27Q96L92 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 AC012158.2-201ENST00000536546 354 ntBASIC15.64■□□□□ 0.09
SNX27Q96L92 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 AC073352.2-201ENST00000609385 439 ntBASIC15.64■□□□□ 0.09
SNX27Q96L92 AL022334.2-201ENST00000610000 484 ntBASIC15.64■□□□□ 0.09
SNX27Q96L92 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.64■□□□□ 0.09
SNX27Q96L92 AC025271.4-201ENST00000621477 1726 ntBASIC15.64■□□□□ 0.09
SNX27Q96L92 AL591471.1-201ENST00000621855 229 ntBASIC15.64■□□□□ 0.09
SNX27Q96L92 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.64■□□□□ 0.09
SNX27Q96L92 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 AC015909.3-201ENST00000572855 1794 ntBASIC15.64■□□□□ 0.09
SNX27Q96L92 RN7SL832P-201ENST00000607781 1756 ntBASIC15.64■□□□□ 0.09
SNX27Q96L92 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SNX27Q96L92 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.64■□□□□ 0.09
SNX27Q96L92 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX27Q96L92 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.63■□□□□ 0.09
SNX27Q96L92 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNX27Q96L92 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.63■□□□□ 0.09
SNX27Q96L92 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.63■□□□□ 0.09
SNX27Q96L92 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SNX27Q96L92 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.63■□□□□ 0.09
SNX27Q96L92 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SNX27Q96L92 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.63■□□□□ 0.09
SNX27Q96L92 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms