Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AL513190.1-201ENST00000621254 727 ntBASIC12.88□□□□□ -0.35
AP3S1Q92572 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.88□□□□□ -0.35
AP3S1Q92572 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.88□□□□□ -0.35
AP3S1Q92572 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
AP3S1Q92572 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
AP3S1Q92572 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 TNRC18P1-201ENST00000502875 3650 ntBASIC12.88□□□□□ -0.35
AP3S1Q92572 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
AP3S1Q92572 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.88□□□□□ -0.35
AP3S1Q92572 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.88□□□□□ -0.35
AP3S1Q92572 AC010970.1-201ENST00000445125 1848 ntBASIC12.88□□□□□ -0.35
AP3S1Q92572 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.88□□□□□ -0.35
AP3S1Q92572 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.88□□□□□ -0.35
AP3S1Q92572 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.87□□□□□ -0.35
AP3S1Q92572 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.87□□□□□ -0.35
AP3S1Q92572 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.87□□□□□ -0.35
AP3S1Q92572 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.87□□□□□ -0.35
AP3S1Q92572 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.87□□□□□ -0.35
AP3S1Q92572 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
AP3S1Q92572 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.87□□□□□ -0.35
AP3S1Q92572 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.87□□□□□ -0.35
AP3S1Q92572 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.87□□□□□ -0.35
AP3S1Q92572 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.87□□□□□ -0.35
AP3S1Q92572 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 KRT18P2-201ENST00000447938 1258 ntBASIC12.87□□□□□ -0.35
AP3S1Q92572 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.87□□□□□ -0.35
AP3S1Q92572 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.87□□□□□ -0.35
AP3S1Q92572 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.87□□□□□ -0.35
AP3S1Q92572 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.87□□□□□ -0.35
AP3S1Q92572 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.87□□□□□ -0.35
AP3S1Q92572 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
AP3S1Q92572 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.87□□□□□ -0.35
AP3S1Q92572 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
AP3S1Q92572 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.87□□□□□ -0.35
AP3S1Q92572 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S1Q92572 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S1Q92572 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S1Q92572 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S1Q92572 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S1Q92572 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S1Q92572 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S1Q92572 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S1Q92572 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S1Q92572 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S1Q92572 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S1Q92572 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
AP3S1Q92572 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S1Q92572 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S1Q92572 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S1Q92572 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S1Q92572 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S1Q92572 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S1Q92572 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S1Q92572 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
AP3S1Q92572 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S1Q92572 MTND6P24-201ENST00000440466 518 ntBASIC12.86□□□□□ -0.35
AP3S1Q92572 KRT8P48-201ENST00000515599 1220 ntBASIC12.86□□□□□ -0.35
AP3S1Q92572 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms