Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 PIN4P1-201ENST00000451079 396 ntBASIC14.57□□□□□ -0.08
HMGB4Q8WW32 IGHV3-37-201ENST00000518544 340 ntBASIC14.57□□□□□ -0.08
HMGB4Q8WW32 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 NUDT4P2-201ENST00000578341 546 ntBASIC14.57□□□□□ -0.08
HMGB4Q8WW32 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 AC084781.1-201ENST00000613737 656 ntBASIC14.57□□□□□ -0.08
HMGB4Q8WW32 AC009560.1-201ENST00000620208 434 ntBASIC14.57□□□□□ -0.08
HMGB4Q8WW32 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 AC091951.1-201ENST00000512854 2465 ntBASIC14.57□□□□□ -0.08
HMGB4Q8WW32 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMGB4Q8WW32 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 HIST2H2BA-201ENST00000412169 381 ntBASIC14.56□□□□□ -0.08
HMGB4Q8WW32 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 ORAOV1P1-201ENST00000503108 395 ntBASIC14.56□□□□□ -0.08
HMGB4Q8WW32 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 AC025262.2-201ENST00000623975 1056 ntBASIC14.56□□□□□ -0.08
HMGB4Q8WW32 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HMGB4Q8WW32 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms