Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 AC114271.1-201ENST00000612689 2813 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 BASP1P1-201ENST00000430708 665 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 GNAQP1-201ENST00000444815 1067 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 VDAC1P7-201ENST00000462417 847 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 RARRES2P5-201ENST00000564013 466 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 AL390955.2-201ENST00000603032 514 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 AC107373.2-201ENST00000607735 490 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 DRD5P1-201ENST00000456605 1438 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 AL137783.1-201ENST00000623494 1896 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
CCDC107Q8WV48 AL158070.2-201ENST00000623713 1621 ntBASIC12.7□□□□□ -0.38
CCDC107Q8WV48 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 RN7SL399P-201ENST00000471648 279 ntBASIC12.69□□□□□ -0.38
CCDC107Q8WV48 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 AL391069.4-201ENST00000609583 481 ntBASIC12.69□□□□□ -0.38
CCDC107Q8WV48 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 AC004790.1-201ENST00000612686 536 ntBASIC12.69□□□□□ -0.38
CCDC107Q8WV48 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 AL138799.1-201ENST00000448213 1675 ntBASIC12.69□□□□□ -0.38
CCDC107Q8WV48 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms