Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 AL356583.3-201ENST00000412354 417 ntBASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 PGAM1P2-201ENST00000436071 725 ntBASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 AL139412.1-201ENST00000441085 523 ntTSL 2 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 BNC2-207ENST00000471301 745 ntTSL 3 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 RN7SL452P-201ENST00000482923 291 ntBASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 SYNPR-AS1-201ENST00000488201 558 ntTSL 5 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 IGHVII-74-1-201ENST00000517572 241 ntBASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 AL356423.1-201ENST00000604953 538 ntBASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 AC007322.2-201ENST00000414540 605 ntBASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 GULOP-201ENST00000454030 748 ntBASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 PQLC2L-204ENST00000459838 850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 PQLC2L-206ENST00000468043 883 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN2Q8NDA2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 AL596087.1-201ENST00000400979 1969 ntBASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 SNORA74.2-201ENST00000516496 180 ntBASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 KRT18P8-201ENST00000581937 1246 ntBASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 C5orf60-208ENST00000625191 1208 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 LINC01128-201ENST00000415295 894 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 PFN1P10-201ENST00000455962 327 ntBASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 AC009238.3-201ENST00000512705 217 ntBASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 MESTP2-201ENST00000559787 889 ntBASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 SNORA50D-202ENST00000627561 132 ntBASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 AC103925.1-201ENST00000453155 771 ntTSL 3 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 ELOC-208ENST00000523815 719 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 AC025165.4-201ENST00000602327 433 ntBASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 AL160408.6-201ENST00000632063 1257 ntTSL 5 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC7.69□□□□□ -1.18
HMCN2Q8NDA2 NOC2LP2-201ENST00000407594 1944 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms