Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC22.32■■□□□ 1.16
VPS8Q8N3P4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS8Q8N3P4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC22.32■■□□□ 1.16
VPS8Q8N3P4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS8Q8N3P4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS8Q8N3P4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC22.32■■□□□ 1.16
VPS8Q8N3P4 AC092506.1-202ENST00000401022 528 ntBASIC22.31■■□□□ 1.16
VPS8Q8N3P4 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 AL139158.3-201ENST00000641212 1562 ntBASIC22.31■■□□□ 1.16
VPS8Q8N3P4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 SLC25A15P3-201ENST00000505530 290 ntBASIC22.31■■□□□ 1.16
VPS8Q8N3P4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 MIR2392-201ENST00000584881 84 ntBASIC22.31■■□□□ 1.16
VPS8Q8N3P4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS8Q8N3P4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 TUBB4AP1-201ENST00000450755 1325 ntBASIC22.3■■□□□ 1.16
VPS8Q8N3P4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 PYY2-201ENST00000315776 282 ntBASIC22.3■■□□□ 1.16
VPS8Q8N3P4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 RPL3P2-204ENST00000413027 1203 ntBASIC22.3■■□□□ 1.16
VPS8Q8N3P4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 MT3-203ENST00000565838 421 ntTSL 3 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 MIR4706-201ENST00000582134 82 ntBASIC22.3■■□□□ 1.16
VPS8Q8N3P4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 AC005618.3-201ENST00000624928 458 ntBASIC22.3■■□□□ 1.16
VPS8Q8N3P4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS8Q8N3P4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 GUSBP10-201ENST00000417412 665 ntBASIC22.29■■□□□ 1.16
VPS8Q8N3P4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 RPL18AP3-201ENST00000462885 528 ntBASIC22.29■■□□□ 1.16
VPS8Q8N3P4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 AC005041.3-201ENST00000606287 649 ntBASIC22.29■■□□□ 1.16
VPS8Q8N3P4 AC103810.10-201ENST00000606504 343 ntBASIC22.29■■□□□ 1.16
VPS8Q8N3P4 AC073352.2-201ENST00000609385 439 ntBASIC22.29■■□□□ 1.16
VPS8Q8N3P4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
VPS8Q8N3P4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms