Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TCAF2P1-201ENST00000291129 2421 ntBASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 AC215219.1-201ENST00000400706 1817 ntBASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 LINC00265-2P-201ENST00000413372 782 ntBASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 RN7SL564P-201ENST00000496309 250 ntBASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 AC145285.5-201ENST00000562217 361 ntBASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 AC011471.3-201ENST00000623576 402 ntBASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS4Q8IUM7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 GNG10P1-201ENST00000452289 199 ntBASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 AC010234.1-201ENST00000494599 870 ntBASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 AL022344.2-201ENST00000568976 968 ntBASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 MIR6074-201ENST00000612054 107 ntBASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 AC023157.3-201ENST00000619086 2088 ntBASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 CTBP2P8-201ENST00000422584 1330 ntBASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS4Q8IUM7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
NPAS4Q8IUM7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
NPAS4Q8IUM7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms