Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 OR7E115P-201ENST00000382617 1024 ntBASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 OR8T1P-201ENST00000421347 918 ntBASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 HNRNPA1P5-201ENST00000558213 966 ntBASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 AC120498.5-201ENST00000561757 299 ntBASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 TYMSP2-201ENST00000589501 424 ntBASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 AC006986.1-201ENST00000612764 241 ntBASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 GGNBP1-204ENST00000613113 887 ntBASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 SLC25A15P1-201ENST00000456738 342 ntBASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 SLC25A15P3-201ENST00000505530 290 ntBASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 MYL6-215ENST00000549566 685 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 KRT8P2-201ENST00000556193 944 ntBASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 AC120498.7-201ENST00000562876 330 ntBASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 CSTP2-201ENST00000610599 398 ntBASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 MIR6893-201ENST00000613458 69 ntBASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms